PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0693s0012.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 235aa    MW: 25315.6 Da    PI: 8.6306
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0693s0012.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like34.64.3e-111233355
              G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55
                         +++m+vkgLtl+h+kSHLQkYRl
  Kalax.0693s0012.2.p  1 MRTMGVKGLTLYHLKSHLQKYRL 23
                         689*******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.8E-10124IPR009057Homeodomain-like
PfamPF143791.9E-2667113IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MRTMGVKGLT LYHLKSHLQK YRLGKQAGKE STENSKEASC MAENQDTGSS ASPSSRVIAQ  60
EINDSYQVTE ALRLQMDVQR RLHEQLEVQR RLQLRIEAQG KYLQAILEKA CKAFNDQAAA  120
AAGLEAAREE LSGLAIKVSH DSQGLAPLDD LKMPSLSDIT TTFASNSQTA PNFPARLGDC  180
SIDSCLTSTG SPASPAGLTA QTASLKRRRR PMTGNGESFP FPSMQAVGWM PNSG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204210LKRRRRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002300173.21e-115myb family transcription factor family protein
TrEMBLB9GFX51e-115B9GFX5_POPTR; Myb family transcription factor family protein
STRINGPOPTR_0001s32200.11e-116(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.12e-74G2-like family protein